Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Vcam1P29533 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Vcam1P29533 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.57□□□□□ -0.08
Vcam1P29533 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Gm14760-201ENSMUST00000121831 999 ntBASIC14.57□□□□□ -0.08
Vcam1P29533 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Vcam1P29533 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Vcam1P29533 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Vcam1P29533 Gm5884-201ENSMUST00000036712 1479 ntBASIC14.57□□□□□ -0.08
Vcam1P29533 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
Vcam1P29533 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Vcam1P29533 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Vcam1P29533 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Vcam1P29533 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Gm9083-201ENSMUST00000120423 819 ntBASIC14.56□□□□□ -0.08
Vcam1P29533 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC14.56□□□□□ -0.08
Vcam1P29533 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC14.56□□□□□ -0.08
Vcam1P29533 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC14.56□□□□□ -0.08
Vcam1P29533 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.56□□□□□ -0.08
Vcam1P29533 AC159205.5-202ENSMUST00000224849 386 ntBASIC14.56□□□□□ -0.08
Vcam1P29533 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.56□□□□□ -0.08
Vcam1P29533 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Gm9996-201ENSMUST00000070359 913 ntBASIC14.56□□□□□ -0.08
Vcam1P29533 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC14.56□□□□□ -0.08
Vcam1P29533 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.56□□□□□ -0.08
Vcam1P29533 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Vcam1P29533 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Vcam1P29533 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Gm6210-201ENSMUST00000204734 1942 ntBASIC14.55□□□□□ -0.08
Vcam1P29533 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Vcam1P29533 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.55□□□□□ -0.08
Vcam1P29533 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.55□□□□□ -0.08
Vcam1P29533 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Vcam1P29533 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.55□□□□□ -0.08
Vcam1P29533 Gm9230-201ENSMUST00000188228 532 ntBASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms