Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.7□□□□□ -0.38
Nckap1P28660 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Nckap1P28660 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm24830-201ENSMUST00000102024 166 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nckap1P28660 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm11531-201ENSMUST00000117614 555 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm12058-201ENSMUST00000118614 437 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm15547-201ENSMUST00000122152 333 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
Nckap1P28660 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm25890-201ENSMUST00000177643 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Rnu1b2-201ENSMUST00000178073 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Rnu1b1-201ENSMUST00000178250 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm22614-201ENSMUST00000178300 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm5950-201ENSMUST00000213337 772 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Gm22042-201ENSMUST00000082989 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm26232-201ENSMUST00000083360 166 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm24136-201ENSMUST00000083374 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Mir339-201ENSMUST00000083659 96 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Gm26110-201ENSMUST00000083971 165 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Nckap1P28660 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nckap1P28660 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Nckap1P28660 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.69□□□□□ -0.38
Nckap1P28660 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Nckap1P28660 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Nckap1P28660 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.69□□□□□ -0.38
Nckap1P28660 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.68□□□□□ -0.38
Nckap1P28660 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm23270-201ENSMUST00000104055 131 ntBASIC12.68□□□□□ -0.38
Nckap1P28660 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.68□□□□□ -0.38
Nckap1P28660 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm11930-201ENSMUST00000117788 190 ntBASIC12.68□□□□□ -0.38
Nckap1P28660 Gm15276-201ENSMUST00000145953 498 ntBASIC12.68□□□□□ -0.38
Nckap1P28660 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.68□□□□□ -0.38
Nckap1P28660 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm13097-201ENSMUST00000210722 397 ntBASIC12.68□□□□□ -0.38
Nckap1P28660 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.68□□□□□ -0.38
Nckap1P28660 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.68□□□□□ -0.38
Nckap1P28660 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.68□□□□□ -0.38
Nckap1P28660 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Nckap1P28660 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms