Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.93□□□□□ -0.18
Pde6bP23440 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Pde6bP23440 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.93□□□□□ -0.18
Pde6bP23440 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC13.93□□□□□ -0.18
Pde6bP23440 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC13.93□□□□□ -0.18
Pde6bP23440 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC13.93□□□□□ -0.18
Pde6bP23440 Gm8099-201ENSMUST00000200510 742 ntBASIC13.93□□□□□ -0.18
Pde6bP23440 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC13.93□□□□□ -0.18
Pde6bP23440 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pde6bP23440 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.93□□□□□ -0.18
Pde6bP23440 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.93□□□□□ -0.18
Pde6bP23440 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pde6bP23440 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pde6bP23440 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.93□□□□□ -0.18
Pde6bP23440 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pde6bP23440 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pde6bP23440 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Gm12997-201ENSMUST00000120207 640 ntBASIC13.92□□□□□ -0.18
Pde6bP23440 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC13.92□□□□□ -0.18
Pde6bP23440 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC13.92□□□□□ -0.18
Pde6bP23440 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.92□□□□□ -0.18
Pde6bP23440 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.92□□□□□ -0.18
Pde6bP23440 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.92□□□□□ -0.18
Pde6bP23440 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.92□□□□□ -0.18
Pde6bP23440 Gm5363-201ENSMUST00000211927 938 ntBASIC13.92□□□□□ -0.18
Pde6bP23440 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.92□□□□□ -0.18
Pde6bP23440 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.92□□□□□ -0.18
Pde6bP23440 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Pde6bP23440 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Pde6bP23440 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.92□□□□□ -0.18
Pde6bP23440 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Pde6bP23440 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Pde6bP23440 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Pde6bP23440 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.91□□□□□ -0.18
Pde6bP23440 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Pde6bP23440 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pde6bP23440 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Gm14704-201ENSMUST00000120300 874 ntBASIC13.91□□□□□ -0.18
Pde6bP23440 Gm12715-201ENSMUST00000121430 1128 ntBASIC13.91□□□□□ -0.18
Pde6bP23440 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC13.91□□□□□ -0.18
Pde6bP23440 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Pde6bP23440 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.91□□□□□ -0.18
Pde6bP23440 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.91□□□□□ -0.18
Pde6bP23440 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC13.91□□□□□ -0.18
Pde6bP23440 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Pde6bP23440 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
Pde6bP23440 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pde6bP23440 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Pde6bP23440 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.91□□□□□ -0.18
Pde6bP23440 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Pde6bP23440 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.9□□□□□ -0.18
Pde6bP23440 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6bP23440 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6bP23440 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pde6bP23440 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms