Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Clk1P22518 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Clk1P22518 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clk1P22518 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clk1P22518 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.95□□□□□ -0.5
Clk1P22518 Gm11814-201ENSMUST00000119515 929 ntBASIC11.95□□□□□ -0.5
Clk1P22518 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Gm44069-201ENSMUST00000204898 506 ntBASIC11.95□□□□□ -0.5
Clk1P22518 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.95□□□□□ -0.5
Clk1P22518 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Gm5356-201ENSMUST00000093326 615 ntBASIC11.95□□□□□ -0.5
Clk1P22518 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.95□□□□□ -0.5
Clk1P22518 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clk1P22518 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clk1P22518 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clk1P22518 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.94□□□□□ -0.5
Clk1P22518 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Gm16202-201ENSMUST00000117532 544 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.94□□□□□ -0.5
Clk1P22518 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.94□□□□□ -0.5
Clk1P22518 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Gm6244-201ENSMUST00000178732 841 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.94□□□□□ -0.5
Clk1P22518 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Clk1P22518 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clk1P22518 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.94□□□□□ -0.5
Clk1P22518 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.94□□□□□ -0.5
Clk1P22518 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clk1P22518 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Clk1P22518 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clk1P22518 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms