Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Cntn1P12960 Mir339-201ENSMUST00000083659 96 ntBASIC12.23□□□□□ -0.45
Cntn1P12960 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.23□□□□□ -0.45
Cntn1P12960 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
Cntn1P12960 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cntn1P12960 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.22□□□□□ -0.45
Cntn1P12960 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Cntn1P12960 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Cntn1P12960 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Cntn1P12960 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.22□□□□□ -0.45
Cntn1P12960 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.22□□□□□ -0.45
Cntn1P12960 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.22□□□□□ -0.45
Cntn1P12960 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.22□□□□□ -0.45
Cntn1P12960 Morn2-202ENSMUST00000227729 656 ntBASIC12.22□□□□□ -0.45
Cntn1P12960 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cntn1P12960 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.22□□□□□ -0.45
Cntn1P12960 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Cntn1P12960 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Cntn1P12960 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.21□□□□□ -0.45
Cntn1P12960 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cntn1P12960 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cntn1P12960 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Cntn1P12960 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.21□□□□□ -0.45
Cntn1P12960 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Cntn1P12960 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Gm10434-201ENSMUST00000101158 471 ntBASIC12.21□□□□□ -0.45
Cntn1P12960 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.21□□□□□ -0.45
Cntn1P12960 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.21□□□□□ -0.45
Cntn1P12960 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Cntn1P12960 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC12.21□□□□□ -0.45
Cntn1P12960 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.21□□□□□ -0.45
Cntn1P12960 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Cntn1P12960 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Cntn1P12960 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Cntn1P12960 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.21□□□□□ -0.46
Cntn1P12960 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Cntn1P12960 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms