Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Ccl1P10146 Gm37437-201ENSMUST00000194451 1937 ntBASIC9.85□□□□□ -0.83
Ccl1P10146 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Ccl1P10146 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC9.85□□□□□ -0.83
Ccl1P10146 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Ccl1P10146 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ccl1P10146 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Gm43727-201ENSMUST00000198021 2647 ntBASIC9.85□□□□□ -0.83
Ccl1P10146 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Ccl1P10146 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Ccl1P10146 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC9.84□□□□□ -0.83
Ccl1P10146 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Map1b-203ENSMUST00000223725 2669 ntBASIC9.84□□□□□ -0.83
Ccl1P10146 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC9.84□□□□□ -0.83
Ccl1P10146 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Ccl1P10146 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC9.84□□□□□ -0.83
Ccl1P10146 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.84□□□□□ -0.83
Ccl1P10146 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC9.84□□□□□ -0.83
Ccl1P10146 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm38144-201ENSMUST00000192790 465 ntBASIC9.84□□□□□ -0.83
Ccl1P10146 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm10459-201ENSMUST00000202708 1155 ntBASIC9.84□□□□□ -0.83
Ccl1P10146 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Ccl1P10146 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccl1P10146 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Ccl1P10146 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ccl1P10146 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.83□□□□□ -0.84
Ccl1P10146 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Ccl1P10146 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Gm2420-201ENSMUST00000119864 2149 ntBASIC9.83□□□□□ -0.84
Ccl1P10146 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ccl1P10146 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms