Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Chmp6P0C0A3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Gm12846-201ENSMUST00000120431 1373 ntBASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Gm7553-201ENSMUST00000185805 1426 ntBASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Chmp6P0C0A3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Mir686-201ENSMUST00000102174 109 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Gm27682-201ENSMUST00000183930 110 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Chmp6P0C0A3 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Chmp6P0C0A3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms