Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
ApoeP08226 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
ApoeP08226 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.06□□□□□ -0.48
ApoeP08226 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
ApoeP08226 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
ApoeP08226 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ApoeP08226 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ApoeP08226 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
ApoeP08226 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.05□□□□□ -0.48
ApoeP08226 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.05□□□□□ -0.48
ApoeP08226 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.05□□□□□ -0.48
ApoeP08226 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.05□□□□□ -0.48
ApoeP08226 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.05□□□□□ -0.48
ApoeP08226 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
ApoeP08226 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.05□□□□□ -0.48
ApoeP08226 Gm18916-201ENSMUST00000198264 1246 ntBASIC12.05□□□□□ -0.48
ApoeP08226 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.05□□□□□ -0.48
ApoeP08226 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.05□□□□□ -0.48
ApoeP08226 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
ApoeP08226 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
ApoeP08226 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.05□□□□□ -0.48
ApoeP08226 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
ApoeP08226 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.04□□□□□ -0.48
ApoeP08226 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
ApoeP08226 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.04□□□□□ -0.48
ApoeP08226 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.04□□□□□ -0.48
ApoeP08226 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.04□□□□□ -0.48
ApoeP08226 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.04□□□□□ -0.48
ApoeP08226 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Gm9797-201ENSMUST00000052902 613 ntBASIC12.04□□□□□ -0.48
ApoeP08226 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.04□□□□□ -0.48
ApoeP08226 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
ApoeP08226 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.04□□□□□ -0.48
ApoeP08226 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.04□□□□□ -0.48
ApoeP08226 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ApoeP08226 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.03□□□□□ -0.48
ApoeP08226 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
ApoeP08226 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ApoeP08226 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ApoeP08226 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms