Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Gm18041-201ENSMUST00000218210 618 ntBASIC13.49□□□□□ -0.25
TnfP06804 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Gm22042-201ENSMUST00000082989 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 Gm26232-201ENSMUST00000083360 166 ntBASIC13.49□□□□□ -0.25
TnfP06804 Gm24136-201ENSMUST00000083374 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.49□□□□□ -0.25
TnfP06804 Gm26110-201ENSMUST00000083971 165 ntBASIC13.49□□□□□ -0.25
TnfP06804 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
TnfP06804 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.49□□□□□ -0.25
TnfP06804 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
TnfP06804 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TnfP06804 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TnfP06804 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.48□□□□□ -0.25
TnfP06804 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TnfP06804 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
TnfP06804 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.48□□□□□ -0.25
TnfP06804 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TnfP06804 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Gm15703-201ENSMUST00000120250 880 ntBASIC13.48□□□□□ -0.25
TnfP06804 Gm13315-201ENSMUST00000120376 991 ntBASIC13.48□□□□□ -0.25
TnfP06804 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC13.48□□□□□ -0.25
TnfP06804 Gm11597-201ENSMUST00000121423 964 ntBASIC13.48□□□□□ -0.25
TnfP06804 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Gm3096-201ENSMUST00000185770 364 ntBASIC13.48□□□□□ -0.25
TnfP06804 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC13.48□□□□□ -0.25
TnfP06804 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.48□□□□□ -0.25
TnfP06804 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TnfP06804 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
TnfP06804 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TnfP06804 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.48□□□□□ -0.25
TnfP06804 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.48□□□□□ -0.25
TnfP06804 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TnfP06804 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.47□□□□□ -0.25
TnfP06804 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TnfP06804 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TnfP06804 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TnfP06804 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Gm14999-201ENSMUST00000121039 624 ntBASIC13.47□□□□□ -0.25
TnfP06804 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TnfP06804 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
TnfP06804 Gm27046-201ENSMUST00000182160 463 ntBASIC13.47□□□□□ -0.25
TnfP06804 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.47□□□□□ -0.25
TnfP06804 Gm8712-201ENSMUST00000221090 701 ntBASIC13.47□□□□□ -0.25
TnfP06804 CT573034.1-201ENSMUST00000222983 313 ntBASIC13.47□□□□□ -0.25
TnfP06804 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TnfP06804 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TnfP06804 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC13.47□□□□□ -0.25
TnfP06804 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.47□□□□□ -0.25
TnfP06804 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TnfP06804 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms