Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.66□□□□□ -0.54
P01852 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.66□□□□□ -0.54
P01852 AC022775.2-201ENSMUST00000227885 646 ntBASIC11.66□□□□□ -0.54
P01852 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
P01852 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.66□□□□□ -0.54
P01852 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.66□□□□□ -0.54
P01852 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
P01852 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
P01852 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.66□□□□□ -0.54
P01852 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
P01852 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.65□□□□□ -0.54
P01852 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Gm43579-201ENSMUST00000202387 1307 ntBASIC11.65□□□□□ -0.54
P01852 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.65□□□□□ -0.54
P01852 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC11.65□□□□□ -0.54
P01852 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Gm13392-201ENSMUST00000117708 150 ntBASIC11.65□□□□□ -0.54
P01852 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
P01852 Gm14704-201ENSMUST00000120300 874 ntBASIC11.65□□□□□ -0.54
P01852 Gm12291-201ENSMUST00000121627 311 ntBASIC11.65□□□□□ -0.54
P01852 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.65□□□□□ -0.54
P01852 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Gm9899-201ENSMUST00000065519 555 ntBASIC11.65□□□□□ -0.54
P01852 Gm10478-201ENSMUST00000084451 396 ntBASIC11.65□□□□□ -0.54
P01852 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
P01852 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
P01852 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
P01852 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
P01852 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.65□□□□□ -0.55
P01852 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
P01852 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
P01852 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
P01852 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
P01852 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
P01852 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.64□□□□□ -0.55
P01852 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC11.64□□□□□ -0.55
P01852 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
P01852 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
P01852 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Gm37008-201ENSMUST00000195712 319 ntBASIC11.64□□□□□ -0.55
P01852 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.64□□□□□ -0.55
P01852 Gm19184-201ENSMUST00000196798 928 ntBASIC11.64□□□□□ -0.55
P01852 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
P01852 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms