Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Mir1247-201ENSMUST00000116706 82 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Gm8062-201ENSMUST00000139696 444 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Gm17420-201ENSMUST00000164753 153 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Gm5904-201ENSMUST00000210286 865 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.61□□□□□ -0.39
Pdlim1O70400 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Pdlim1O70400 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Pdlim1O70400 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Pck2-205ENSMUST00000226352 2784 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm38002-201ENSMUST00000193255 180 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm42627-201ENSMUST00000197347 224 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.6□□□□□ -0.39
Pdlim1O70400 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pdlim1O70400 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Pdlim1O70400 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gm43133-201ENSMUST00000197472 463 ntBASIC12.59□□□□□ -0.39
Pdlim1O70400 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.59□□□□□ -0.39
Pdlim1O70400 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gm10478-201ENSMUST00000084451 396 ntBASIC12.59□□□□□ -0.39
Pdlim1O70400 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim1O70400 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim1O70400 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms