Protein–RNA interactions for Protein: O55028

Bckdk, [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial, mousemouse

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BckdkO55028 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.83□□□□□ -0.52
BckdkO55028 Gm19184-201ENSMUST00000196798 928 ntBASIC11.83□□□□□ -0.52
BckdkO55028 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.83□□□□□ -0.52
BckdkO55028 Gm45880-201ENSMUST00000213041 853 ntBASIC11.83□□□□□ -0.52
BckdkO55028 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Gm7399-201ENSMUST00000032395 858 ntBASIC11.83□□□□□ -0.52
BckdkO55028 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
BckdkO55028 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BckdkO55028 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
BckdkO55028 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
BckdkO55028 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.82□□□□□ -0.52
BckdkO55028 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Gm23931-201ENSMUST00000103842 109 ntBASIC11.82□□□□□ -0.52
BckdkO55028 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
BckdkO55028 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
BckdkO55028 Gm2231-201ENSMUST00000125661 612 ntBASIC11.82□□□□□ -0.52
BckdkO55028 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.82□□□□□ -0.52
BckdkO55028 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC11.82□□□□□ -0.52
BckdkO55028 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 Gm44069-201ENSMUST00000204898 506 ntBASIC11.82□□□□□ -0.52
BckdkO55028 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.82□□□□□ -0.52
BckdkO55028 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.82□□□□□ -0.52
BckdkO55028 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
BckdkO55028 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
BckdkO55028 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.81□□□□□ -0.52
BckdkO55028 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
BckdkO55028 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.81□□□□□ -0.52
BckdkO55028 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
BckdkO55028 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.81□□□□□ -0.52
BckdkO55028 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
BckdkO55028 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Gm15198-201ENSMUST00000117283 177 ntBASIC11.81□□□□□ -0.52
BckdkO55028 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC11.81□□□□□ -0.52
BckdkO55028 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.81□□□□□ -0.52
BckdkO55028 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
BckdkO55028 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.81□□□□□ -0.52
BckdkO55028 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.81□□□□□ -0.52
BckdkO55028 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.81□□□□□ -0.52
BckdkO55028 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Gm10146-201ENSMUST00000072739 309 ntBASIC11.81□□□□□ -0.52
BckdkO55028 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
BckdkO55028 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
BckdkO55028 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms