Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Npc1O35604 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Npc1O35604 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.44□□□□□ -0.42
Npc1O35604 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.44□□□□□ -0.42
Npc1O35604 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Npc1O35604 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Gm9025-201ENSMUST00000122415 1575 ntBASIC12.43□□□□□ -0.42
Npc1O35604 AC113060.1-201ENSMUST00000225689 1573 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.43□□□□□ -0.42
Npc1O35604 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Gm12291-201ENSMUST00000121627 311 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Npc1O35604 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Gm43118-201ENSMUST00000199149 775 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.43□□□□□ -0.42
Npc1O35604 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Npc1O35604 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.43□□□□□ -0.42
Npc1O35604 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.43□□□□□ -0.42
Npc1O35604 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.43□□□□□ -0.42
Npc1O35604 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.43□□□□□ -0.42
Npc1O35604 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Npc1O35604 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Npc1O35604 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.42□□□□□ -0.42
Npc1O35604 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.42□□□□□ -0.42
Npc1O35604 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.42□□□□□ -0.42
Npc1O35604 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.42□□□□□ -0.42
Npc1O35604 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.42□□□□□ -0.42
Npc1O35604 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Gm11793-201ENSMUST00000120433 981 ntBASIC12.42□□□□□ -0.42
Npc1O35604 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Npc1O35604 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.42□□□□□ -0.42
Npc1O35604 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.42□□□□□ -0.42
Npc1O35604 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Npc1O35604 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.42□□□□□ -0.42
Npc1O35604 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.42□□□□□ -0.42
Npc1O35604 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Npc1O35604 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms