Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Stx1aO35526 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Gm37324-201ENSMUST00000194500 4504 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Gm12341-201ENSMUST00000119724 503 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.29□□□□□ -0.12
Stx1aO35526 Mir6956-201ENSMUST00000183598 62 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Gm27390-201ENSMUST00000184516 176 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 Gm18307-201ENSMUST00000206864 949 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.29□□□□□ -0.12
Stx1aO35526 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.29□□□□□ -0.12
Stx1aO35526 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC14.29□□□□□ -0.12
Stx1aO35526 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Stx1aO35526 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Stx1aO35526 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.28□□□□□ -0.12
Stx1aO35526 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC14.28□□□□□ -0.12
Stx1aO35526 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC14.28□□□□□ -0.12
Stx1aO35526 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Stx1aO35526 Paupar-201ENSMUST00000194826 3482 ntBASIC14.28□□□□□ -0.12
Stx1aO35526 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Stx1aO35526 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Stx1aO35526 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.28□□□□□ -0.12
Stx1aO35526 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.28□□□□□ -0.12
Stx1aO35526 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Stx1aO35526 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Stx1aO35526 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.27□□□□□ -0.12
Stx1aO35526 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.27□□□□□ -0.12
Stx1aO35526 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.27□□□□□ -0.12
Stx1aO35526 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Stx1aO35526 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Stx1aO35526 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Stx1aO35526 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Stx1aO35526 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC14.27□□□□□ -0.13
Stx1aO35526 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stx1aO35526 Gm6152-201ENSMUST00000151704 340 ntBASIC14.27□□□□□ -0.13
Stx1aO35526 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC14.27□□□□□ -0.13
Stx1aO35526 Gm7063-201ENSMUST00000186840 981 ntBASIC14.27□□□□□ -0.13
Stx1aO35526 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stx1aO35526 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stx1aO35526 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Stx1aO35526 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Stx1aO35526 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Stx1aO35526 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
Stx1aO35526 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Stx1aO35526 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Stx1aO35526 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Gm38049-201ENSMUST00000195698 1372 ntBASIC14.26□□□□□ -0.13
Stx1aO35526 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Stx1aO35526 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms