Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Gm11524-201ENSMUST00000119349 807 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Gm15321-201ENSMUST00000121290 288 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Gm15376-201ENSMUST00000122258 783 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC10.07□□□□□ -0.8
Efnb3O35393 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC10.07□□□□□ -0.8
Efnb3O35393 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Gm27437-201ENSMUST00000183429 107 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Gm19078-201ENSMUST00000206311 727 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 AC165157.4-201ENSMUST00000220587 139 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.07□□□□□ -0.8
Efnb3O35393 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Efnb3O35393 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Efnb3O35393 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC10.06□□□□□ -0.8
Efnb3O35393 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC10.06□□□□□ -0.8
Efnb3O35393 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Gm21854-201ENSMUST00000179901 471 ntBASIC10.06□□□□□ -0.8
Efnb3O35393 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Gm9522-201ENSMUST00000182394 926 ntBASIC10.06□□□□□ -0.8
Efnb3O35393 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC10.06□□□□□ -0.8
Efnb3O35393 AC125206.2-201ENSMUST00000217454 574 ntBASIC10.06□□□□□ -0.8
Efnb3O35393 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC10.06□□□□□ -0.8
Efnb3O35393 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.06□□□□□ -0.8
Efnb3O35393 Gm26315-201ENSMUST00000083890 321 ntBASIC10.06□□□□□ -0.8
Efnb3O35393 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.06□□□□□ -0.8
Efnb3O35393 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.06□□□□□ -0.8
Efnb3O35393 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Efnb3O35393 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Efnb3O35393 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Efnb3O35393 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms