Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.11□□□□□ -0.31
Trove2O08848 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC13.1□□□□□ -0.31
Trove2O08848 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Trove2O08848 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.1□□□□□ -0.31
Trove2O08848 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.1□□□□□ -0.31
Trove2O08848 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Gm43094-201ENSMUST00000196549 921 ntBASIC13.1□□□□□ -0.31
Trove2O08848 Gm7730-201ENSMUST00000212486 454 ntBASIC13.1□□□□□ -0.31
Trove2O08848 Gm18636-201ENSMUST00000218846 1066 ntBASIC13.1□□□□□ -0.31
Trove2O08848 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.1□□□□□ -0.31
Trove2O08848 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 Gm45532-201ENSMUST00000210342 3620 ntBASIC13.1□□□□□ -0.31
Trove2O08848 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
Trove2O08848 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.1□□□□□ -0.31
Trove2O08848 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trove2O08848 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Gm11524-201ENSMUST00000119349 807 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Gm42612-201ENSMUST00000197986 623 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Gm43170-201ENSMUST00000199827 612 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Gm44855-201ENSMUST00000205725 362 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.09□□□□□ -0.31
Trove2O08848 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Trove2O08848 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trove2O08848 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.08□□□□□ -0.31
Trove2O08848 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Trove2O08848 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
Trove2O08848 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.08□□□□□ -0.32
Trove2O08848 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trove2O08848 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.08□□□□□ -0.32
Trove2O08848 Gm5354-201ENSMUST00000182417 973 ntBASIC13.08□□□□□ -0.32
Trove2O08848 Mir6977-201ENSMUST00000184960 64 ntBASIC13.08□□□□□ -0.32
Trove2O08848 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.08□□□□□ -0.32
Trove2O08848 Gm19078-201ENSMUST00000206311 727 ntBASIC13.08□□□□□ -0.32
Trove2O08848 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms