Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm23935-201ENSMUST00000102303 57 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm24270-201ENSMUST00000102326 57 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm24245-201ENSMUST00000157318 57 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm43575-201ENSMUST00000196420 516 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm20445-201ENSMUST00000061905 565 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.6□□□□□ -0.55
Shisa8J3QNX5 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Shisa8J3QNX5 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm13616-201ENSMUST00000120600 222 ntBASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm15487-201ENSMUST00000122373 465 ntBASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Shisa8J3QNX5 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Shisa8J3QNX5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.55
Shisa8J3QNX5 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Shisa8J3QNX5 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Shisa8J3QNX5 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Shisa8J3QNX5 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Shisa8J3QNX5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms