Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Gm44401-201ENSMUST00000204462 2375 ntBASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ccdc180J3QNE4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Adap2os-201ENSMUST00000140556 984 ntTSL 5 BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm10774-201ENSMUST00000188689 204 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 AC154290.1-201ENSMUST00000223786 1240 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm1821-202ENSMUST00000227415 750 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm7002-201ENSMUST00000221386 2165 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm26286-201ENSMUST00000104166 134 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm15881-201ENSMUST00000148792 942 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm9785-201ENSMUST00000062642 1006 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Gm26035-201ENSMUST00000083065 308 ntBASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ccdc180J3QNE4 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ccdc180J3QNE4 Gm15432-201ENSMUST00000121106 195 ntBASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 Gm9022-201ENSMUST00000182482 992 ntBASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 Gm42682-201ENSMUST00000198349 1265 ntBASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 AC141438.2-201ENSMUST00000215068 271 ntBASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 AC135114.1-201ENSMUST00000228682 270 ntBASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
Ccdc180J3QNE4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Gm43045-201ENSMUST00000198725 2095 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Gm9072-201ENSMUST00000218390 1514 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Gm13611-201ENSMUST00000118269 318 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Gm14724-201ENSMUST00000118400 537 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Gm8194-201ENSMUST00000159783 859 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Ccdc180J3QNE4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Gm3332-201ENSMUST00000189337 928 ntBASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Gm44980-201ENSMUST00000205826 314 ntBASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Ccdc180J3QNE4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms