Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Gm17271-201ENSMUST00000165535 355 ntBASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Chchd1-203ENSMUST00000224633 557 ntBASIC13.06□□□□□ -0.32
Trim55G3X8Y1 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Trim55G3X8Y1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 AC156031.2-201ENSMUST00000213107 3310 ntBASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Thap2-203ENSMUST00000218989 527 ntBASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trim55G3X8Y1 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Dopey2-207ENSMUST00000227156 7340 ntBASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Trim55G3X8Y1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Gm37542-201ENSMUST00000192563 2832 ntBASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trim55G3X8Y1 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms