Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Pcdh9F8VPK8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Pcdh9F8VPK8 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Matn2-203ENSMUST00000226766 3252 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gm11637-201ENSMUST00000120601 592 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gm23363-201ENSMUST00000175024 79 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gm9002-201ENSMUST00000178437 499 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gm7653-201ENSMUST00000214567 508 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Gm5356-201ENSMUST00000093326 615 ntBASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh9F8VPK8 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Pck2-205ENSMUST00000226352 2784 ntBASIC13.02□□□□□ -0.32
Pcdh9F8VPK8 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm15806-201ENSMUST00000120696 955 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm16479-201ENSMUST00000121706 932 ntBASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh9F8VPK8 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms