Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc188F6WEU2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm15566-201ENSMUST00000121130 590 ntBASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ccdc188F6WEU2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm11619-201ENSMUST00000117474 237 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Rprl1-201ENSMUST00000158050 327 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm9507-202ENSMUST00000180157 654 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ccdc188F6WEU2 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc188F6WEU2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc188F6WEU2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc188F6WEU2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc188F6WEU2 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ccdc188F6WEU2 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Ccdc188F6WEU2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms