Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ube4aE9Q735 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm9022-201ENSMUST00000182482 992 ntBASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm9230-201ENSMUST00000188228 532 ntBASIC15.24■□□□□ 0.03
Ube4aE9Q735 AC107638.1-201ENSMUST00000213690 1061 ntBASIC15.24■□□□□ 0.03
Ube4aE9Q735 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.24■□□□□ 0.03
Ube4aE9Q735 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.24■□□□□ 0.03
Ube4aE9Q735 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gm43858-201ENSMUST00000199418 1778 ntBASIC15.24■□□□□ 0.03
Ube4aE9Q735 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.24■□□□□ 0.03
Ube4aE9Q735 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ube4aE9Q735 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.23■□□□□ 0.03
Ube4aE9Q735 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gm9083-201ENSMUST00000120423 819 ntBASIC15.23■□□□□ 0.03
Ube4aE9Q735 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ube4aE9Q735 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Gm27552-201ENSMUST00000183351 62 ntBASIC15.22■□□□□ 0.03
Ube4aE9Q735 Gm27844-201ENSMUST00000183613 62 ntBASIC15.22■□□□□ 0.03
Ube4aE9Q735 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC15.22■□□□□ 0.03
Ube4aE9Q735 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.22■□□□□ 0.03
Ube4aE9Q735 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ube4aE9Q735 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms