Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Gm7063-201ENSMUST00000186840 981 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Gm8463-201ENSMUST00000208573 613 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Gm9908-201ENSMUST00000211534 448 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Gm28043E0CXC2 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm5687-201ENSMUST00000118252 640 ntBASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm6745-201ENSMUST00000199216 526 ntBASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm45384-201ENSMUST00000210451 277 ntBASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.78□□□□□ -0.36
Gm28043E0CXC2 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Gm28043E0CXC2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Gm11918-201ENSMUST00000121660 179 ntBASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.77□□□□□ -0.37
Gm28043E0CXC2 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Gm9794-201ENSMUST00000202370 423 ntBASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm28043E0CXC2 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Gm28043E0CXC2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms