Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.54□□□□□ -0.08
Syce3B5KM66 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm9522-201ENSMUST00000182394 926 ntBASIC14.54□□□□□ -0.08
Syce3B5KM66 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.54□□□□□ -0.08
Syce3B5KM66 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.54□□□□□ -0.08
Syce3B5KM66 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.54□□□□□ -0.08
Syce3B5KM66 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.54□□□□□ -0.08
Syce3B5KM66 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm18630-201ENSMUST00000222109 1397 ntBASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.54□□□□□ -0.08
Syce3B5KM66 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.54□□□□□ -0.08
Syce3B5KM66 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Syce3B5KM66 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.53□□□□□ -0.08
Syce3B5KM66 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC14.53□□□□□ -0.08
Syce3B5KM66 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.53□□□□□ -0.08
Syce3B5KM66 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Syce3B5KM66 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Syce3B5KM66 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.52□□□□□ -0.08
Syce3B5KM66 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC14.52□□□□□ -0.08
Syce3B5KM66 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Syce3B5KM66 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC14.52□□□□□ -0.08
Syce3B5KM66 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.52□□□□□ -0.08
Syce3B5KM66 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Syce3B5KM66 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Syce3B5KM66 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Syce3B5KM66 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Syce3B5KM66 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC14.52□□□□□ -0.09
Syce3B5KM66 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.52□□□□□ -0.09
Syce3B5KM66 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.52□□□□□ -0.09
Syce3B5KM66 Gm5279-201ENSMUST00000199575 745 ntBASIC14.52□□□□□ -0.09
Syce3B5KM66 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Syce3B5KM66 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms