Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Cd63-ps-201ENSMUST00000145417 875 ntBASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Gm26035-201ENSMUST00000083065 308 ntBASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Gm12887B1AVM1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Gm12887B1AVM1 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Cog3-203ENSMUST00000227473 4197 ntBASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm7390-201ENSMUST00000212452 1216 ntBASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Gm12887B1AVM1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Gm12887B1AVM1 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms