Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm11451-201ENSMUST00000118946 630 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm34023-201ENSMUST00000195539 217 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm45575-201ENSMUST00000210283 548 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Col4a6B1AVK5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm5852-201ENSMUST00000194119 1021 ntBASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Col4a6B1AVK5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm23045-201ENSMUST00000175041 96 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm23771-201ENSMUST00000178702 110 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm43186-201ENSMUST00000198130 824 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gm18711-201ENSMUST00000199341 750 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Col4a6B1AVK5 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms