Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15678-201ENSMUST00000117573 960 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm6415-201ENSMUST00000118488 348 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mir1897-201ENSMUST00000122581 272 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm27430-201ENSMUST00000184585 107 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44333-201ENSMUST00000197168 107 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm5312-201ENSMUST00000203728 547 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44771-201ENSMUST00000206975 626 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC225888.1-201ENSMUST00000227184 728 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm45496-201ENSMUST00000209918 2917 ntBASIC9.66□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 CT009713.5-203ENSMUST00000224218 2079 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm24513-201ENSMUST00000174964 138 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm27533-201ENSMUST00000183800 152 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm43514-201ENSMUST00000198852 424 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm44124-201ENSMUST00000204159 472 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm46209-201ENSMUST00000217912 553 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Shd-206ENSMUST00000225145 998 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Gm3695-201ENSMUST00000087222 1009 ntBASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
Trav3n-3A0A0G2JEM0 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
Trav3n-3A0A0G2JEM0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC9.65□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms