Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Tmed9-203ENSMUST00000224741 1450 ntBASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Trav6n-6A0A075B6B2 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm18262-201ENSMUST00000222560 1946 ntBASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm42943-201ENSMUST00000199676 3242 ntBASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Gm3052-202ENSMUST00000188254 2224 ntBASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Trav6n-6A0A075B6B2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm15240-201ENSMUST00000118156 720 ntBASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm10110-202ENSMUST00000228705 3220 ntBASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm8337-201ENSMUST00000187358 1938 ntBASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Trav6n-6A0A075B6B2 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Gm36957-201ENSMUST00000192982 2824 ntBASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Trav6n-6A0A075B6B2 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms