Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm45668-201ENSMUST00000211271 493 ntBASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm6458-201ENSMUST00000211573 635 ntBASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 AC125108.1-201ENSMUST00000218986 2330 ntBASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Trav5-4A0A075B652 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 CT025535.1-201ENSMUST00000227172 491 ntBASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm16372-201ENSMUST00000073088 450 ntBASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm15222-202ENSMUST00000228667 1726 ntBASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Trav5-4A0A075B652 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Gm12928-201ENSMUST00000117115 573 ntBASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav5-4A0A075B652 Gm44069-201ENSMUST00000204898 506 ntBASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms