Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Lhx6Q9R1R0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm45177-201ENSMUST00000209104 2307 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm11524-201ENSMUST00000119349 807 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm10156-201ENSMUST00000122364 462 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm21542-201ENSMUST00000182307 993 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm27331-201ENSMUST00000183705 60 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm8151-201ENSMUST00000184817 871 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm19078-201ENSMUST00000206311 727 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Gm19885-201ENSMUST00000212853 343 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 AC132881.1-201ENSMUST00000223780 1062 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 AC157654.1-201ENSMUST00000224130 820 ntBASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Lhx6Q9R1R0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gm15371-201ENSMUST00000117057 784 ntBASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gm12383-201ENSMUST00000120628 760 ntBASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.5□□□□□ -0.41
Lhx6Q9R1R0 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms