Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.09□□□□□ -0.47
SrfQ9JM73 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
SrfQ9JM73 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
SrfQ9JM73 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SrfQ9JM73 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
SrfQ9JM73 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm6335-201ENSMUST00000118081 1194 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm7816-201ENSMUST00000119884 1194 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm15542-201ENSMUST00000121585 1194 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Mir1943-201ENSMUST00000158276 73 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm7003-201ENSMUST00000195089 312 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm40332-201ENSMUST00000199847 938 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm34272-201ENSMUST00000208886 253 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm14267-206ENSMUST00000226870 1209 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.08□□□□□ -0.48
SrfQ9JM73 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SrfQ9JM73 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
SrfQ9JM73 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.07□□□□□ -0.48
SrfQ9JM73 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm13315-201ENSMUST00000120376 991 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm9211-201ENSMUST00000182882 975 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Gm9826-201ENSMUST00000029124 1299 ntBASIC12.07□□□□□ -0.48
SrfQ9JM73 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SrfQ9JM73 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SrfQ9JM73 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms