Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Hmgn5Q9JL35 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm15376-201ENSMUST00000122258 783 ntBASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm27430-201ENSMUST00000184585 107 ntBASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm44333-201ENSMUST00000197168 107 ntBASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gm6888-201ENSMUST00000221983 706 ntBASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Hmgn5Q9JL35 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Hmgn5Q9JL35 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgn5Q9JL35 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgn5Q9JL35 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgn5Q9JL35 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Hmgn5Q9JL35 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms