Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Gm17271-201ENSMUST00000165535 355 ntBASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Gm2213-201ENSMUST00000197485 688 ntBASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Upk3bl1Q9D701 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm11594-201ENSMUST00000122313 162 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Rprl2-201ENSMUST00000157150 290 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm27525-201ENSMUST00000184465 107 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm7063-201ENSMUST00000186840 981 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm34272-201ENSMUST00000208886 253 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 CT009713.1-201ENSMUST00000224828 853 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Upk3bl1Q9D701 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Upk3bl1Q9D701 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms