Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Mir686-201ENSMUST00000102174 109 ntBASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Ndc80Q9D0F1 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Gm24644-201ENSMUST00000157114 139 ntBASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Gm22331-201ENSMUST00000158066 136 ntBASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Gm37497-201ENSMUST00000195830 798 ntBASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ndc80Q9D0F1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ndc80Q9D0F1 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms