Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ssu72Q9CY97 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ssu72Q9CY97 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm12384-201ENSMUST00000119228 919 ntBASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm15703-201ENSMUST00000120250 880 ntBASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.64□□□□□ -0.39
Ssu72Q9CY97 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssu72Q9CY97 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Gm13616-201ENSMUST00000120600 222 ntBASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssu72Q9CY97 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms