Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Khdc3Q9CWU5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm16479-201ENSMUST00000121706 932 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm24644-201ENSMUST00000157114 139 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm26185-201ENSMUST00000157692 266 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm10146-201ENSMUST00000072739 309 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Gm6091-201ENSMUST00000098307 165 ntBASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Khdc3Q9CWU5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.23□□□□□ -0.45
Khdc3Q9CWU5 Gm27331-201ENSMUST00000183705 60 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms