Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Lsm7Q9CQQ8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm26083-201ENSMUST00000157904 193 ntBASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm8176-201ENSMUST00000191297 1099 ntBASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm38000-201ENSMUST00000192390 1215 ntBASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Lsm7Q9CQQ8 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm24255-201ENSMUST00000104481 128 ntBASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm31256-201ENSMUST00000194705 506 ntBASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Lsm7Q9CQQ8 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Matn2-206ENSMUST00000228570 2798 ntBASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Lsm7Q9CQQ8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms