Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Gm7730-201ENSMUST00000212486 454 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ska1Q9CPV1 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.07□□□□□ -0.48
Ska1Q9CPV1 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Ska1Q9CPV1 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Gm28631-201ENSMUST00000190740 334 ntBASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ska1Q9CPV1 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms