Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh15Q99PJ1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Pcdh15Q99PJ1 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Pcdh15Q99PJ1 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC14.06□□□□□ -0.16
Pcdh15Q99PJ1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm14942-201ENSMUST00000119642 336 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm18201-201ENSMUST00000174735 875 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm9116-201ENSMUST00000192400 1018 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm38117-201ENSMUST00000194653 939 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm18706-201ENSMUST00000210053 1066 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm18204-201ENSMUST00000209835 793 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm45410-201ENSMUST00000211331 1093 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdh15Q99PJ1 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm42433-201ENSMUST00000196806 940 ntBASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm18198-201ENSMUST00000204986 1551 ntBASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdh15Q99PJ1 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm15036-201ENSMUST00000118880 400 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm13022-201ENSMUST00000121181 285 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm22442-201ENSMUST00000157256 144 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm18968-201ENSMUST00000221319 862 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 CT030653.1-201ENSMUST00000224382 1279 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm18711-201ENSMUST00000199341 750 ntBASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdh15Q99PJ1 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms