Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Gm1335-201ENSMUST00000121653 386 ntBASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Gm19184-201ENSMUST00000196798 928 ntBASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 AC153937.1-201ENSMUST00000218734 412 ntBASIC13.7□□□□□ -0.22
Tlr3Q99MB1 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.7□□□□□ -0.22
Tlr3Q99MB1 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Tlr3Q99MB1 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm6210-201ENSMUST00000204734 1942 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm23931-201ENSMUST00000103842 109 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm38266-201ENSMUST00000194931 421 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm18054-201ENSMUST00000207539 555 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm32025-201ENSMUST00000217960 307 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tlr3Q99MB1 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Gm3961-201ENSMUST00000204425 994 ntBASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tlr3Q99MB1 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms