Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Nkx6-1Q99MA9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm4993-201ENSMUST00000118719 1174 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm6963-201ENSMUST00000147879 379 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm28196-201ENSMUST00000187719 640 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm19087-201ENSMUST00000191430 946 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm32999-201ENSMUST00000192693 562 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx6-1Q99MA9 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Gm18558-201ENSMUST00000186253 1214 ntBASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx6-1Q99MA9 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx6-1Q99MA9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms