Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcd2Q99JR8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm14644-201ENSMUST00000116671 647 ntBASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm24514-201ENSMUST00000174961 285 ntBASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcd2Q99JR8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm42769-201ENSMUST00000198576 1659 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm20426-201ENSMUST00000173657 440 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm5523-201ENSMUST00000180415 997 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm37666-201ENSMUST00000194110 866 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Smarcd2Q99JR8 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Smarcd2Q99JR8 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
Smarcd2Q99JR8 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms