Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm5161-201ENSMUST00000075243 853 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.87□□□□□ -0.35
Cdk9Q99J95 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cdk9Q99J95 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Gm4875-201ENSMUST00000118257 786 ntBASIC12.86□□□□□ -0.35
Cdk9Q99J95 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.86□□□□□ -0.35
Cdk9Q99J95 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Gm17795-201ENSMUST00000214505 757 ntBASIC12.86□□□□□ -0.35
Cdk9Q99J95 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cdk9Q99J95 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Gm4204-201ENSMUST00000110798 1231 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Gm7063-201ENSMUST00000186840 981 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.85□□□□□ -0.35
Cdk9Q99J95 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cdk9Q99J95 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Cdk9Q99J95 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.84□□□□□ -0.35
Cdk9Q99J95 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms