Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdha9Q91Y11 Daam2-202ENSMUST00000224595 1926 ntBASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gm45930-201ENSMUST00000221330 292 ntBASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Pcdha9Q91Y11 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm11964-201ENSMUST00000120982 444 ntBASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm38002-201ENSMUST00000193255 180 ntBASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm26035-201ENSMUST00000083065 308 ntBASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Pcdha9Q91Y11 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Pcdha9Q91Y11 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms