Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 AC154252.1-201ENSMUST00000226041 473 ntBASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Gm42943-201ENSMUST00000199676 3242 ntBASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Pcdhb3Q91XZ7 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm22189-201ENSMUST00000103822 86 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm21470-201ENSMUST00000187680 696 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm28631-201ENSMUST00000190740 334 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm6218-201ENSMUST00000219812 628 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Gm18829-201ENSMUST00000188150 1622 ntBASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb3Q91XZ7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb3Q91XZ7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb3Q91XZ7 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb3Q91XZ7 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
Pcdhb3Q91XZ7 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb3Q91XZ7 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Mir698-201ENSMUST00000102164 109 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gm12859-201ENSMUST00000117834 427 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gm26693-201ENSMUST00000181318 1021 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.89□□□□□ -0.35
Pcdhb3Q91XZ7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms