Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb6Q91XZ4 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Snora73a-201ENSMUST00000082453 205 ntBASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhb6Q91XZ4 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb6Q91XZ4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Pcdhb6Q91XZ4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pcdhb6Q91XZ4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gm2639-201ENSMUST00000156881 1297 ntBASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Gm44124-201ENSMUST00000204159 472 ntBASIC13.07□□□□□ -0.32
Pcdhb6Q91XZ4 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms