Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Pcdhga4Q91XY4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm12957-201ENSMUST00000117835 377 ntBASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm13369-201ENSMUST00000119442 987 ntBASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm17420-201ENSMUST00000164753 153 ntBASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm10268-201ENSMUST00000085340 555 ntBASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pcdhga4Q91XY4 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Pcdhga4Q91XY4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhga4Q91XY4 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhga4Q91XY4 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhga4Q91XY4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhga4Q91XY4 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pcdhga4Q91XY4 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gm13123-201ENSMUST00000122173 492 ntBASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gm37424-201ENSMUST00000191727 561 ntBASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gm19931-201ENSMUST00000198920 368 ntBASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pcdhga4Q91XY4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pcdhga4Q91XY4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms