Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.58□□□□□ -0.08
Trex1Q91XB0 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trex1Q91XB0 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.57□□□□□ -0.08
Trex1Q91XB0 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Gm23200-201ENSMUST00000104379 132 ntBASIC14.57□□□□□ -0.08
Trex1Q91XB0 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC14.57□□□□□ -0.08
Trex1Q91XB0 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trex1Q91XB0 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.56□□□□□ -0.08
Trex1Q91XB0 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Gm7003-201ENSMUST00000195089 312 ntBASIC14.56□□□□□ -0.08
Trex1Q91XB0 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trex1Q91XB0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm12566-201ENSMUST00000121479 359 ntBASIC14.55□□□□□ -0.08
Trex1Q91XB0 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Mir3547-201ENSMUST00000175461 88 ntBASIC14.55□□□□□ -0.08
Trex1Q91XB0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Gm42937-201ENSMUST00000197360 752 ntBASIC14.55□□□□□ -0.08
Trex1Q91XB0 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.55□□□□□ -0.08
Trex1Q91XB0 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms