Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vsx1Q91V10 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.62□□□□□ -0.39
Vsx1Q91V10 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Vsx1Q91V10 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
Vsx1Q91V10 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.62□□□□□ -0.39
Vsx1Q91V10 Selenot-ps-201ENSMUST00000119098 593 ntBASIC12.62□□□□□ -0.39
Vsx1Q91V10 Gm14665-201ENSMUST00000122294 557 ntBASIC12.62□□□□□ -0.39
Vsx1Q91V10 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Gm22121-201ENSMUST00000175148 54 ntBASIC12.62□□□□□ -0.39
Vsx1Q91V10 Gm9555-201ENSMUST00000200908 583 ntBASIC12.62□□□□□ -0.39
Vsx1Q91V10 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Vsx1Q91V10 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.61□□□□□ -0.39
Vsx1Q91V10 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.61□□□□□ -0.39
Vsx1Q91V10 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.61□□□□□ -0.39
Vsx1Q91V10 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.61□□□□□ -0.39
Vsx1Q91V10 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.61□□□□□ -0.39
Vsx1Q91V10 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Vsx1Q91V10 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Vsx1Q91V10 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms