Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm10156-201ENSMUST00000122364 462 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Mir1894-201ENSMUST00000122802 81 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm8810-201ENSMUST00000172895 754 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm6244-201ENSMUST00000178732 841 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm18916-201ENSMUST00000198264 1246 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm45059-201ENSMUST00000205558 1077 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm17794-201ENSMUST00000220252 955 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.69□□□□□ -0.7
H1fooQ8VIK3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm11803-201ENSMUST00000119966 444 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm13813-201ENSMUST00000120998 787 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm27892-201ENSMUST00000185017 106 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm9794-201ENSMUST00000202370 423 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm44414-201ENSMUST00000203660 2109 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 AC110817.1-201ENSMUST00000225706 605 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
H1fooQ8VIK3 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
H1fooQ8VIK3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms